91影库

Award

A pandemic focus on a notorious protein

Jay Thakkar
Aug. 1, 2024

During the COVID-19 pandemic, Gabriela Dias Noske and other researchers at the University of Sao Paulo — like scientists all over the world — shifted their research projects toward the SARS-CoV-2 virus. Dias Noske was working with proteases at the time, so she pivoted to the main protease of the virus and worked to assess its structural features for drug design.

Gabriela Dias Noske
Gabriela Dias Noske

The research was not without its challenges, especially during the pandemic, with lab resources scarce and inaccessible at times.

“It was very demanding because we were working with no weekends and no holidays, just working with only four people in the lab to keep the lab working,” Dias Noske said. “But it was a very nice thing to be able to be there and doing something for a pandemic.”

The main protease, or Mpro, of the SARS-CoV-2 virus is an important protein in disease progression. Dias Noske and colleagues sought to determine the structural basis of antivirals such as nirmatrelvir and ensitrelvir and how these drugs inhibit Mpro and its mutations.

Dias Noske conducted activity-based screening assays and structural data analysis using crystallographic data. She found many key interactions between the antivirals and the Mpro mutations, which will aid in developing the next generation of antivirals that inhibit Mpro and its mutations.

For published in the Journal of Biological Chemistry, Dias Noske received a 2024 .

A physics major during her undergraduate studies, Dias Noske decided to specialize in biomolecular physics in grad school. She began by using crystallography to solve the crystal structure of viral proteins. Having worked on several viruses during her doctoral studies, she is now working on cryo-electron tomography, imaging virus–host interactions within cells using a microscope.

Mutations and drug activity

Antivirals are used to inhibit viral replication and stop the progression of viral diseases like COVID-19. Researchers need to understand the structure and mutations of Mpro as it is a crucial part of viral replication and can cause antiviral resistance.

Gabriela Dias Noske and a team at the University of Sao Paulo studied 14 naturally occurring polymorphs of Mpro against the antivirals nirmatrelvir and ensitrelvir to understand the key interactions in protein inhibition. They showed that there were changes in potency — the amount of drug required for a desired effect. The drug–target interactions were confined to a specific binding site, where the drug binds to a number of amino acid residues in the protein sequence. Changes in the structure within the binding site affect drug interactions, and the drug loses its ability to cause a desired response.

Activity-based screening assays compared potency for the 14 mutants and wild-type Mpro for the two drugs. Nirmatrelvir showed slightly lower potency for most of the polymorphs, and ensitrelvir showed significantly lower potency with respect to the wild type. The data also suggest a distinctive binding profile for the two drugs.

Enjoy reading 91影库Today?

Become a member to receive the print edition four times a year and the digital edition monthly.

Learn more
Jay Thakkar

Jay Thakkar is a researcher, who specializes in computer-aided drug design and discovery. He earned a bachelor's degree in chemical engineering from the Dwarkadas J. Sanghvi College of Engineering in Mumbai, India, and a master's degree in chemistry from the Stevens Institute of Technology in Hoboken, New Jersey, where he studied drug discovery. His hobbies include reading, driving on open roads and walking in the park.
 

Get the latest from 91影库Today

Enter your email address, and we鈥檒l send you a weekly email with recent articles, interviews and more.

Latest in People

People highlights or most popular articles

Fliesler wins scientific and ethical awards
Member News

Fliesler wins scientific and ethical awards

July 21, 2025

He is being honored by the University at Buffalo and the American Oil Chemists' Society for his scientific achievements and ethical integrity.

Hope for a cure hangs on research
Essay

Hope for a cure hangs on research

July 17, 2025

Amid drastic proposed cuts to biomedical research, rare disease families like Hailey Adkisson鈥檚 fight for survival and hope. Without funding, science can鈥檛 鈥渃atch up鈥 to help the patients who need it most.

Before we鈥檝e lost what we can鈥檛 rebuild: Hope for prion disease
Feature

Before we鈥檝e lost what we can鈥檛 rebuild: Hope for prion disease

July 15, 2025

Sonia Vallabh and Eric Minikel, a husband-and-wife team racing to cure prion disease, helped develop ION717, an antisense oligonucleotide treatment now in clinical trials. Their mission is personal 鈥 and just getting started.

91影库members recognized as Allen investigators
Member News

91影库members recognized as Allen investigators

July 14, 2025

Ileana Cristea, Sarah Cohen, Itay Budin and Christopher Obara are among 14 researchers selected as Allen Distinguished Investigators by the Paul G. Allen Family Foundation.

AI can be an asset, 91影库educators say
Advice

AI can be an asset, 91影库educators say

July 9, 2025

Pedagogy experts share how they use artificial intelligence to save time, increase accessibility and prepare students for a changing world.

91影库undergraduate education programs foster tomorrow鈥檚 scientific minds
Feature

91影库undergraduate education programs foster tomorrow鈥檚 scientific minds

July 8, 2025

Learn how the society empowers educators and the next generation of scientists through community as well as accreditation and professional development programs that support evidence-based teaching and inclusive pedagogy.